het siRNAsPlant small RNA genesmiRNA

SITE UNDER CONSTRUCTION - BE WARNED, NOT FULLY FUNCTIONAL OR TESTED


Core Eudicots - Rosids

Brassica napus (Rapeseed)
Brassicales, Brassicaceae
Genome build: bna-b1
Annotated small RNA loci: 97,608
Brassica oleracea var. capitata (Cabbage)
Brassicales, Brassicaceae
Genome build: bol-b1.0
Annotated small RNA loci: 21,437
Brassica rapa var. pekinensis (Chinese Cabbage)
Brassicales, Brassicaceae
Genome build: bra-b1
Annotated small RNA loci: 37,084
Carica papaya (Papaya)
Brassicales, Caricaceae
Genome build: cpa-b0.4
Annotated small RNA loci: 29,654
Citrullus lanatus (Watermelon)
Cucurbitales, Cucurbitaceae
Genome build: clt-b1
Annotated small RNA loci: 85,560
Cucumis sativus (Cucumber)
Cucurbitales, Cucurbitaceae
Genome build: csa-b2
Annotated small RNA loci: 71,054
Cicer arietinum (Chickpea)
Fabales, Fabaceae
Genome build: car-b2.0
Annotated small RNA loci: 40,959
Glycine max (Soybean)
Fabales, Fabaceae
Genome build: gma-b1.0
Annotated small RNA loci: 73,161
Medicago truncatula (Barrel Medic)
Fabales, Fabaceae
Genome build: mtr-b4.0
Annotated small RNA loci: 118,102
Phaseolus vulgaris (Common Bean)
Fabales, Fabaceae
Genome build: pvu-b1.0
Annotated small RNA loci: 42,102
Hevea brasiliensis (Rubber Tree)
Malpighiales, Euphorbiaceae
Genome build: hbr-b0
Annotated small RNA loci: 6,539
Manihot esculenta (Cassava)
Malpighiales, Euphorbiaceae
Genome build: mes-b6
Annotated small RNA loci: 37,048
Populus trichocarpa (Black Cottonwood)
Malpighiales, Salicaceae
Genome build: ptc-b3.0
Annotated small RNA loci: 10,831
Gossypium barbadense (Pima Cotton)
Malvales, Malvaceae
Genome build: gba-b1.0
Annotated small RNA loci: 73,991
Gossypium hirsutum (Upland Cotton)
Malvales, Malvaceae
Genome build: ghr-b1.1
Annotated small RNA loci: 142,424
Theobroma cacao (Cacao)
Malvales, Malvaceae
Genome build: tcc-b1.1
Annotated small RNA loci: 12,670
Fragaria vesca (Woodland Strawberry)
Rosales, Rosaceae
Genome build: fve-b2.0
Annotated small RNA loci: 54,899
Fragaria x ananassa (Strawberry)
Rosales, Rosaceae
Genome build: fan-b1.0
Annotated small RNA loci: 17,221
Malus x domestica (Apple)
Rosales, Rosaceae
Genome build: mdm-b3.0
Annotated small RNA loci: 99,568
Prunus persica (Peach)
Rosales, Rosaceae
Genome build: ppe-b2.0
Annotated small RNA loci: 40,905
Citrus clementina (Clementine)
Sapindales, Rutaceae
Genome build: ccl-b1
Annotated small RNA loci: 14,240
Citrus sinensis (Sweet Orange)
Sapindales, Rutaceae
Genome build: csi-b2
Annotated small RNA loci: 72,347

Core Eudicots - Asterids

Daucus carota (Carrot)
Apiales, Apiaceae
Genome build: dca-b2.0
Annotated small RNA loci: 27,730
Lactuca sativa (Lettuce)
Asterales, Asteraceae
Genome build: lsa-b8
Annotated small RNA loci: 13,774
Olea europaea (Olive Tree)
Lamiales, Oleaceae
Genome build: oeu-b6
Annotated small RNA loci: 52,884
Cuscuta campestris (Field Dodder)
Solanales, Convolvulaceae
Genome build: ccm-b0.32
Annotated small RNA loci: 125,965
Capsicum annuum (Pepper)
Solanales, Solanaceae
Genome build: can-b1.6
Annotated small RNA loci: 86,709
Nicotiana tabacum (Tobacco)
Solanales, Solanaceae
Genome build: nta-b0
Annotated small RNA loci: 45,306
Solanum lycopersicum (Tomato)
Solanales, Solanaceae
Genome build: sly-b2.5
Annotated small RNA loci: 153,530
Solanum tuberosum (Potato)
Solanales, Solanaceae
Genome build: stu-b4.04
Annotated small RNA loci: 76,974

Core Eudicots

Beta vulgaris (Beet)
Caryophyllales, Amaranthaceae
Genome build: bvu-b1.2.2
Annotated small RNA loci: 43,104
Chenopodium quinoa (Quinoa)
Caryophyllales, Amaranthaceae
Genome build: cqi-b1.0
Annotated small RNA loci: 9,517
Spinacia oleracea (Spinach)
Caryophyllales, Amaranthaceae
Genome build: sol-b1
Annotated small RNA loci: 57,677

Monocots

Elaeis guineensis (African Oil Palm)
Arecales, Arecaceae
Genome build: egu-b5.1
Annotated small RNA loci: 49,318
Brachypodium distachyon (Stiff brome)
Poales, Poaceae
Genome build: bdi-b1.0
Annotated small RNA loci: 64,180
Hordeum vulgare (Barley)
Poales, Poaceae
Genome build: hvu-b1
Annotated small RNA loci: 29,494
Oryza sativa (Rice)
Poales, Poaceae
Genome build: osa-b1.0
Annotated small RNA loci: 148,812
Setaria italica (Foxtail Millet)
Poales, Poaceae
Genome build: sit-b2
Annotated small RNA loci: 30,008
Sorghum bicolor (Sorghum)
Poales, Poaceae
Genome build: sbi-b3.0
Annotated small RNA loci: 24,865
Triticum aestivum (Wheat)
Poales, Poaceae
Genome build: tae-b1
Annotated small RNA loci: 65,950
Zea mays (Maize)
Poales, Poaceae
Genome build: zma-b4
Annotated small RNA loci: 129,324
Musa acuminata (Banana)
Zingiberales, Musaceae
Genome build: mac-b2
Annotated small RNA loci: 30,825

Bryophytes

Physcomitrella patens (Speading earthmoss)
Funariales, Funariaceae
Genome build: ppt-b3.0
Annotated small RNA loci: 12,609